Delicious Homemade Pumpkin Whoopie Pies with Dreamy Cream Cheese Filling
There’s nothing quite like the cozy embrace of fall, and these Pumpkin Whoopie Pies are truly the quintessential treat to celebrate the season. Imagine sinking your teeth into a soft, spiced pumpkin cake-like cookie, lightly coated in a sweet, seasoned sugar, perfectly complemented by a luscious, tangy cream cheese filling. It’s a flavor and texture combination that will transport you straight to autumn bliss!

These aren’t just any fall dessert; they are a true showstopper. Every time I share these Pumpkin Whoopie Pies, they receive rave reviews and disappear in a flash. While the recipe involves a few steps, the process is incredibly rewarding, and the active preparation time is surprisingly manageable. Don’t be intimidated by the ingredient list; the result is a labor of love that is absolutely worth every moment once you experience that first delightful bite.
Ready to dive in? Use the JUMP TO RECIPE button below, or scroll to the bottom of the post to find the complete recipe card with detailed ingredient measurements and instructions.
Key Ingredients for the Perfect Pumpkin Whoopie Pies
Crafting these delectable whoopie pies means working with a slightly longer ingredient list than some recipes, as you’re essentially making three components: the pumpkin cookie halves, a spiced sugar coating, and the creamy filling. Each ingredient plays a crucial role in building the layers of flavor and texture that make these treats so special. We’ll be using butter in both the cookie and the filling, along with pumpkin puree for that signature fall taste, and a medley of spices that evoke the essence of autumn.

One of the secrets to baking success, especially with recipes like this, is ensuring all your dairy and eggs are at room temperature. This allows for smoother mixing, better emulsification, and a lighter, fluffier end product. Don’t skip the small amount of salt in the seasoned sugar; it’s a brilliant touch that cuts through the sweetness, enhancing all the other wonderful flavors. While there are a few components, the active time in the kitchen isn’t overwhelming, and you’ll find these homemade whoopie pies are easier to make than you might think!
Crafting Your Homemade Pumpkin Whoopie Pies: A Detailed Method
Part 1: Preparing the Fluffy Pumpkin Cookie Halves
The foundation of any great whoopie pie is its cake-like cookie shell. For our pumpkin whoopie pies, these soft, spiced bases are a dream. We begin by creaming together the softened butter and sugars until they are light and fluffy. This aeration is key to achieving that tender, cake-like texture. Next, incorporate the rich pumpkin puree and a large egg, ensuring everything is thoroughly blended. Finally, gently fold in your dry ingredients – flour, pumpkin spice mix, baking powder, baking soda, and kosher salt – just until the batter comes together. Overmixing at this stage can lead to tough cookies, so mix until just combined.



Once your batter is ready, it’s time to portion it out. Using a cookie scoop helps ensure uniform size, which is important for even baking and easy assembly later. Drop the batter onto prepared baking sheets, leaving a little space between each mound. Give them a gentle press to slightly flatten them; this helps them bake into nice, even rounds. Bake until they are beautifully puffed and their edges turn a light golden brown. Let them cool completely on the baking sheet before attempting to move them. This prevents breakage and ensures they hold their shape.


With the cookie halves cooled, it’s time for a special touch: the seasoned sugar coating. Lightly brush the tops of the cooled pumpkin cakes with a very thin layer of melted butter. The key here is “lightly”—just enough to make the sugar adhere without making the surface greasy. Then, gently dip each buttered cookie half, top-side down, into a mixture of granulated sugar seasoned with extra pumpkin spice and a touch of salt. The salt is a secret ingredient here, wonderfully balancing the sweetness of the pumpkin and filling, creating a more complex and satisfying flavor profile. Do not omit it!



Part 2: Whipping Up the Dreamy Cream Cheese Filling
No whoopie pie is complete without its signature filling, and for these pumpkin delights, a rich and tangy cream cheese buttercream is an absolute must. In the bowl of your stand mixer, whip together softened butter and room temperature cream cheese until the mixture is incredibly light and fluffy. This aeration process is crucial for a smooth, pillowy filling. Gradually add the powdered sugar, mixing on low speed to prevent a sugar cloud, then increase speed to fully incorporate. Finish by beating in vanilla extract or, for an extra layer of flavor, vanilla bean paste, until the filling is wonderfully light, airy, and cloud-like.


Part 3: Assembling Your Perfect Pumpkin Whoopie Pies
Now for the most exciting part: assembling your beautiful Pumpkin Whoopie Pies! Take half of your cooled, sugared pumpkin cookie halves and turn them flat-side up. Using a piping bag fitted with your favorite tip (a round or star tip works wonderfully), pipe a generous dollop of the cream cheese filling onto the center of each. You can be as creative as you like with your piping – simple swirls, elegant stars, or just a neat mound – there’s no wrong way to fill them! Then, gently place another sugared pumpkin cookie half on top, flat-side down, to create the sandwich. Press down just enough to lightly secure the top cookie to the filling.



Once assembled, these delightful treats can be enjoyed immediately, offering a soft, fresh experience. For best results and to allow the flavors to meld beautifully, you can also refrigerate them in an airtight container. They will keep wonderfully for up to 5 days, making them perfect for preparing ahead for parties, gatherings, or simply to have a delicious fall snack ready when cravings strike.

Expert Tips for Whoopie Pie Perfection
Baking can be an art and a science, and these pro tips will help ensure your Pumpkin Whoopie Pies turn out flawlessly every time:
- Room Temperature Ingredients are Non-Negotiable: This is perhaps the most crucial tip for baking. Ensure your butter, cream cheese, and egg are all at true room temperature. Cold ingredients can cause butter to seize in mixtures, lead to lumpy cream cheese filling, and prevent proper emulsification, resulting in a less smooth and airy texture overall. Plan ahead and take them out of the fridge at least 30-60 minutes before you start baking.
- Efficient Workflow: To streamline the baking process, prepare your spiced sugar topping and make the cream cheese filling while your pumpkin cookie halves are baking and cooling. Once the filling is made, transfer it to a piping bag (or even a sturdy zip-top bag with a corner snipped off) so it’s ready to go as soon as the cookies are cool. This reduces idle time and makes assembly a breeze.
- Homemade Pumpkin Spice Mix: Elevate your whoopie pies by using a homemade pumpkin spice mix! A freshly ground and blended spice mix offers a vibrancy that store-bought versions sometimes lack. I highly recommend making your own Pumpkin Spice Mix. It’s often a little different, more aromatic, and you can easily mix up a batch at the start of the fall season to use in all your autumnal baking.
- Light Butter Layer is Key: When brushing the baked cookie halves with melted butter before coating them in sugar, remember that a very light hand is essential. You’re just aiming for enough butter to create a tacky surface for the sugar to adhere to. Too much butter can make the sugar coating turn gummy or cakey, detracting from the delicate texture.
- Patience with Cooling: Resist the urge to fill your whoopie pies before the cookie halves are completely cool. If they are even slightly warm, the cream cheese filling will melt and ooze out, creating a messy situation instead of a perfectly sandwiched treat. Allow ample time for cooling on the baking sheets.
- Storage Savvy: Store assembled whoopie pies in an airtight container in the refrigerator. This keeps the cream cheese filling firm and prevents the cookie halves from drying out. They are best enjoyed within 3-5 days.
Customizing Your Pumpkin Whoopie Pies: Simple Substitutions & Variations
This recipe is wonderfully versatile, allowing for minor adjustments to suit your pantry or taste preferences:
- Pumpkin Spice Mix Alternatives: If you don’t have a pumpkin spice mix on hand or prefer to keep things simple, you can easily create your own blend. A good starting point is a combination of 1 teaspoon cinnamon and ½ teaspoon nutmeg to replace the pumpkin spice mix in the cookie batter. You can also add a pinch of ground ginger and cloves for more depth.
- Vanilla Options: While I love using vanilla bean paste for its intense flavor and visible specks, standard vanilla extract works beautifully as well. Use an equal amount of good quality vanilla extract if you don’t have paste. For an extra festive touch, consider a hint of maple extract in the filling.
- Cream Cheese Filling Variations: Feel free to experiment with the cream cheese filling. A dash of cinnamon or a tiny pinch of ginger can be added to the filling for an even spicier kick. For a less sweet filling, you can slightly reduce the powdered sugar, but be mindful that this might alter the consistency.
- Gluten-Free Option: While not tested, you might be able to substitute the all-purpose flour with a 1:1 gluten-free baking flour blend that contains xanthan gum for a gluten-free version. Results may vary, so proceed with caution.
- Nut-Free: This recipe is naturally nut-free, making it a great option for those with nut allergies.

More Fall Favorites to Explore
If you love the flavors of autumn, be sure to check out these other fantastic fall-inspired recipes from our kitchen:
- The Ultimate Candy Corn and Peanuts Fall Snack Mix
- Irresistible Apple Streusel Muffins
- Pecan Shortbread Cookies with Maple and Bacon
- Decadent Caramel Apple Crisp Cheesecake
- Hearty Red Wine Braised Short Ribs
- Comforting Pot Roast Sandwiches
- Flavorful Roasted Butternut Squash Ravioli
Did you try this amazing Pumpkin Whoopie Pie recipe? I would absolutely love to hear about your experience! Please leave a review or comment below, and don’t forget to sign up for my newsletter to get more delicious recipes delivered straight to your inbox. You can also follow along on Instagram, Pinterest, and Facebook for daily inspiration and behind-the-scenes fun!
📖 Recipe Card

Pumpkin Whoopie Pies
30 minutes
15 minutes
45 minutes
These Pumpkin Whoopie Pies are the tastiest fall treat. Soft pumpkin cookies that have been lightly sugared with a cream cheese filling, YUM!
Ingredients
for the cookies:
- 12 tablespoons Unsalted Butter, soft room temp
- ¾ cup Light Brown Sugar, packed
- 1 large Egg, room temperature
- ½ cup Pumpkin Puree
- 3 cups All-Purpose Flour
- 1 tablespoon Pumpkin Spice Mix
- 2 teaspoons Baking Powder
- ½ teaspoon Baking Soda
- ½ teaspoon Kosher Salt, Morton
for the cookie topping:
- 1 tablespoon Unsalted Butter, melted
- ¾ cup Granulated Sugar
- ¾ teaspoon Pumpkin Spice Mix
- ¼ teaspoon Nutmeg, freshly grated
- ¼ teaspoon Kosher Salt
for the buttercream filling:
- 8 tablespoons Unsalted Butter, soft room temp
- 1, 8-ounce package Cream Cheese, room temp
- 4 cups Powdered Sugar
- ½ teaspoon Vanilla Bean Paste
Instructions
for the cookies:
- Preheat oven to 350°F and line 2 rimmed baking sheets with parchment paper or Silpat baking liner.
- In the bowl of a stand mixer fitted with the paddle attachment, cream together the butter and brown sugar at medium speed until fluffy, 3 to 4 minutes. Scrape down the sides of the bowl 2-3 times during the creaming.
- Beat the egg and pumpkin puree in until well combined.
- Add the flour, pumpkin spice mix, baking powder, soda, salt, and vanilla to the mixer bowl.
- With the mixer on low speed, blend just until the flour is completely worked into the wet mixture.
- Using a 1-ounce cookie scoop, place level scoops of the cookie batter onto your prepared baking sheets.
- Bake immediately in the preheated oven until the bottom edges are lightly golden and the tops are dry, 12 to 14 minutes. Rotate the pans halfway through baking, turning them around and changing from the bottom and top oven racks.
- When the cookies are done baking, let the cookies cool completely on the pans before trying to remove them.
- While the cookies cool, stir together the granulated sugar, pumpkin spice mix, nutmeg, and salt in a small bowl.
- Working with one cookie at a time, brush the top and edges of each with a little melted butter and immediately dredge the cookies, top side down through the spiced sugar.
- Pipe filling onto the flat side of half of the cookies using a piping bag and your favorite piping tip. Place the remaining cookies, flat side down, onto the buttercream to connect the two cookies.
- Serve immediately, or refrigerate in an airtight container for up to 5 days.
for the buttercream filling:
- In the bowl of a stand mixer fitted with the paddle attachment, beat the butter at medium speed until smooth, about 1 minute.
- Add the cream cheese to the bowl and beat until smooth. Scrape down the bowl.
- Place the powdered sugar in the bowl and turn the mixer on low until worked into the butter and cream cheese.
- Add the vanilla and turn the mixer up to medium speed for 30-45 seconds until the mixture is fluffy. Place the mixture in a piping back fitted with your favorite piping tip.
Notes
Notes & Tips
As usual, when baking, be sure that all of your ingredients are at room temperature. Having one thing too cold, like the eggs, can make the butter seize up. And cream cheese that is too cold will end up lumpy.
To make quick and easy work of the few steps this recipe has, stir up the sugar topping and make the filling while the cookies bake and cool. And place the filling in a piping bag, or even a zip-top bag so it is ready to pipe when they are cooled.
I like to use this recipe as an opportunity to put my homemade Pumpkin Spice Mix in it. It is a great mix, that is just a LITTLE different than what you can buy in the store. I just mix up one batch a season for all my pumpkin baking.
When brushing the baked cookies with the butter, be sure to do a very light layer, you are just putting enough on to make the sugar stick. Too much butter and it will make the sugar cakey.
Be sure the cookies are fully cool before adding the filling. If they are at all warm the filling will melt and ooze out of them instead of just smoshing in the middle.
Substitutions
If you don’t have pumpkin spice mix or the ingredients to whip some up, replace it with some cinnamon and nutmeg.
I like to use vanilla bean paste for a little extra flavor in this recipe, but simple vanilla extract will do the job too.
Recommended Products
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- CFS 4038000-E Sparta Round Basting/Pastry Brush with Boar Bristles, 1
- Vollrath 2 oz Stainless Steel Disher – Size 16,Dark Blue
- Norpro Stainless Steel Scoop, 25MM (.5 Tablespoon)
- SMARTAKE 200 Pcs Parchment Paper Baking Sheets, 12×16 Inches Non-Stick Precut Baking Parchment, Perfect for Baking Grilling Air Fryer Steaming Bread Cup Cake Cookie and More (Unbleached)
- Nordic Ware Natural Aluminum Commercial Baker’s Half Sheet (3 Pack)
- KitchenAid KSM3316XER Artisan Mini Stand Mixers, 3.5 quart, Empire Red
Nutrition Information:
Yield:
18
Serving Size:
1
Amount Per Serving:
Calories: 417Total Fat: 19gSaturated Fat: 12gTrans Fat: 0gUnsaturated Fat: 6gCholesterol: 61mgSodium: 196mgCarbohydrates: 59gFiber: 1gSugar: 42gProtein: 4g
This is an estimated caloric value, actual numbers may differ based on the ingredients used.
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